ACTIONr PhD Summer School University of Thessaly

Overview

Through lectures by leading scientists in the fields of environmental microbiology, microbial ecology, plant biotechnology, and soil biogeochemistry, participants will explore the mechanisms underlying BNI, the physiological and ecological roles of ammonia-oxidizing microorganisms, and the potential for harnessing plant metabolic pathways and traits to improve nitrogen use efficiency. 

The ACTIONr PhD Summer School programme from University of Thessaly will also examine how plant-derived nitrification inhibitors can contribute to sustainable nitrogen management and mitigate nitrogen losses in agricultural systems. Theoretical sessions will be complemented by practical training, including high-throughput screening methods for BNI activity, amplicon sequencing techniques for microbial community analysis, and key aspects of big data analysis. 

Participants will be introduced to essential concepts for handling large biological datasets, covering principal component analysis (PCA) plots and clustering methods as fundamental tools for the interpretation of data related to BNI mechanisms and microbial interactions. Additionally, participants will explore novel approaches, such as soil phage therapy for microbial nitrogen cycling management, as well as strategies for breeding crops with enhanced BNI capacity.

What you'll learn

By the end of the course, participants will:

• Gain insights into the physiological and ecological roles of ammonia-oxidizing microorganisms and their interactions with plants

• Learn how plant metabolic pathways and traits contribute to improving nitrogen use efficiency and sustainable agricultural practices

• Develop hands-on experience with high-throughput screening methods for BNI activity and amplicon sequencing techniques for analyzing microbial communities

• Gain practical skills in working with big data workflows for analyzing and interpreting large biological datasets related to the impact of BNI on the nitrogen cycle

• Gain knowledge of novel strategies for managing microbial nitrogen cycling, including soil phage therapy

• Learn the latest industry perspectives on BNI applications in agricultural systems and the potential for breeding crops with enhanced BNI capacity